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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926944.1_cds_XP_016474871.1_66853
CDS Infomation

[gene=LOC107796591] [db_xref=GeneID:107796591] [protein=phosphoglucomutase isoform X2] [protein_id=XP_016474871.1] [location=complement(join(70038..70145,70233..70310,70603..70699,70780..70931,71024..71119,75176..75237,75315..75387,75477..75558,75640..75757,75845..75905,77060..77124,77419..77655,77886..77974,78879..78931,82087..82264,83242..83308,91775..91781))] [gbkey=CDS]
Sequence

ATGGCAGCTGCCTCATCGGCCACTGCAATTCCGTTTGTTGAGAAAAGCGACTTTCTTAAG
CTTCAGAATGGCAGTGATATACGTGGAGTAGCCGTTGATGGAGTTGAGGGAGAACCTCTT
ACTCTCACGGAGCCAGTTACAGAAGCAATAGCAGCAGGGTTTGCTGGCTGGTTGAAAAAG
AAATATGATTCTTCTAAACGTCTAAGAGTCTCCATCGGTCATGACTCACGAATTTCTGCG
CAGAAGTTGCAGGATGCAGTTTCTCAAGGACTTGCTAGAGCTGGAGTTGAAGTCATCCAG
TATGGATTGGCATCCACACCAGCCATGTTCAACAGCACTCTTACAGTAGATGAAGAATTT
TCCTGTCCAGTGGATGGCTCCATAATGATTACAGCAAGCCATCTTCCCTACAACAGGAAT
GGGTTCAAATTCTTTACACGTGCTGGAGGTCTTGGAAAGCCAGACATCAAAGATATCTTG
GAGCGAGCTGCAGAGATATACAAAAATATTGCAAATGAAGATTCTAAGGGGGCGGAAACA
GCTGTTTCTCTATCTGTTAAAAGAGTGGATTACATGTCCATTTATGCCTCTAATCTTGTG
GCAGCAGTCCGCAGAGCTGCAGGAAATATAGAAAAGCCACTGGAAGGATTCCATATCGTA
GTTGATGCAGGGAACGGAGCAGGGGGATTCTTTGTAGGAAAGGTGCTTGAGCCTCTGGGT
GCTATTACTTCTGGTAGTCAGTTCTTGGAACCAGATGGTTTGTTTCCCAATCATATACCT
AACCCAGAGGATAAAACAGCCATGAAAGCTATCACCAAGGCAGTACTCGATAACAGGGCT
GATTTGGGAATCATCTTTGATACAGATGTTGACAGGTCTGCAGCTGTGGATTCGAGTGGT
CGTGAATTTAACCGAAATCGTTTGATTGCTTTAATGTCTGCAATTGTTTTGGAGGAACAT
CCTGGGACCACTATTGTCACAGACAGTGTTACATCAGATGGGCTGACAACATTTATTGAA
AAGAAACTAGGAGGGAAGCATCACAGGTTCAAAAGAGGATACAAGAATGTAATTGATGAA
GCTATTCGTCTGAACTCTGTTGGTGAGGAAGCACATTTGGCTATTGAAACTAGTGGCCAT
GGAGCTCTAAAGGAGAATCATTGGCTTGATGATGGTGCATACCTTATGGTGAAGTTACTG
AATAAGCTTGCATCAGCTAGAACATCGGGACAAGGAAGCGGCAGCAAAGTCTTGACTGAC
ATGGTGGAGGGTCTTGAAGAACCAGCTGTTGCTGTTGAACTTAGACTAAAGATCGATAAT
CAATCAGATCTTATAGGAGGATCCTTCCGTGATTATGGGGAAGCAGTGTTGAAGCAGCTT
GAGAATACAGTTGACTCAGATGCTAAGCTTCTAAAAGCACCTGTTAACTATGAAGGGGTT
AGAGTTTCTGGTTATGGAGGGTGGTTCCTTCTAAGACTTTCACTACATGACCCTGTTCTA
CCCCTTAATATTGAGGCACCAAGCAACGAGGCTGCTGTAAAACTTGCTCATGATGTGCTT
AATGCTGTGAAAGAGTTCACCGCCCTTGATACCTCCGCCTTGACTAAGTTTGTTGGAGCA
TGA

Peptide Sequence

PEP ID

XP_016474871.1
PEP Infomation

PREDICTED: phosphoglucomutase isoform X2 [Nicotiana tabacum]
Sequence

MAAASSATAIPFVEKSDFLKLQNGSDIRGVAVDGVEGEPLTLTEPVTEAIAAGFAGWLKK
KYDSSKRLRVSIGHDSRISAQKLQDAVSQGLARAGVEVIQYGLASTPAMFNSTLTVDEEF
SCPVDGSIMITASHLPYNRNGFKFFTRAGGLGKPDIKDILERAAEIYKNIANEDSKGAET
AVSLSVKRVDYMSIYASNLVAAVRRAAGNIEKPLEGFHIVVDAGNGAGGFFVGKVLEPLG
AITSGSQFLEPDGLFPNHIPNPEDKTAMKAITKAVLDNRADLGIIFDTDVDRSAAVDSSG
REFNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDE
AIRLNSVGEEAHLAIETSGHGALKENHWLDDGAYLMVKLLNKLASARTSGQGSGSKVLTD
MVEGLEEPAVAVELRLKIDNQSDLIGGSFRDYGEAVLKQLENTVDSDAKLLKAPVNYEGV
RVSGYGGWFLLRLSLHDPVLPLNIEAPSNEAAVKLAHDVLNAVKEFTALDTSALTKFVGA

Transcript Sequence

Gene sequence data has not been registered.